Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT3G55160

Type: Protein	GRN ID: np25117	Name:
Annotation:	unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Gene Locus:	AT3G55160
Gene Expression (Affy ATH1 probeset):	251833_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

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Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT3G55160 -- has similar expression pattern (mutual information value=0.820623) with -- ILA
3	AT3G55160 -- has similar expression pattern (mutual information value=0.820623) with -- ILA -- has similar expression pattern (mutual information value=0.816088) with -- EMB2762
4	AT3G55160 -- has similar expression pattern (mutual information value=0.820623) with -- ILA -- has similar expression pattern (mutual information value=0.912355) with -- CARB; VEN3
5	AT3G55160 -- has similar expression pattern (mutual information value=0.820623) with -- ILA -- has similar expression pattern (mutual information value=0.827691) with -- AT3G58610

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