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Location:  Home > Details for node AT3G52230
Type: Protein GRN ID: np24721 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT3G52230
Gene Expression (Affy ATH1 probeset): 256680_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G52230  --  has similar expression pattern (mutual information value=0.824982) with  --  ATHMT-1; HMT-1
3 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200
4 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155
5 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR
6 AT3G52230  --  has similar expression pattern (mutual information value=0.824982) with  --  ATHMT-1; HMT-1  --  interacts with  --  ARR2
7 AT3G52230  --  has similar expression pattern (mutual information value=0.824982) with  --  ATHMT-1; HMT-1  --  has similar expression pattern (mutual information value=0.86034) with  --  AT1G52590
8 AT3G52230  --  has similar expression pattern (mutual information value=0.824982) with  --  ATHMT-1; HMT-1  --  has product (in catalytic reaction)  --  L-Methionine
9 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.967523) with  --  APG2; PGA2; TATC; UNE3
10 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.809208) with  --  PDE318
11 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=1.02174) with  --  AT1G29700
12 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=1.01281) with  --  AT1G28140
13 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.931991) with  --  AT3G19800
14 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.92924) with  --  AT4G10000
15 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.927569) with  --  ATSS4; SS4; SSIV
16 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.942202) with  --  AT4G22830
17 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=1.01085) with  --  ATHDA14; hda14
18 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.816307) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
19 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.970118) with  --  AT3G51510
20 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.938572) with  --  PGL34
21 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.891499) with  --  CRL
22 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.883118) with  --  AT5G52960
23 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=1.04586) with  --  CcdA
24 AT3G52230  --  has similar expression pattern (mutual information value=0.838946) with  --  AT4G13200  --  has similar expression pattern (mutual information value=0.811194) with  --  AT1G45230
25 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  interacts with  --  CIP8
26 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  interacts with  --  AT1G68670
27 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.826437) with  --  PEX11D
28 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.812437) with  --  PTAC6
29 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.807905) with  --  GAUT6
30 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.898456) with  --  ATCLC-E; CLC-E; CLCE
31 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.891852) with  --  AT5G02710
32 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.951862) with  --  AT5G48590
33 AT3G52230  --  has similar expression pattern (mutual information value=0.823983) with  --  AT3G52155  --  has similar expression pattern (mutual information value=0.829057) with  --  HCF106
34 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  interacts with  --  ACD1; LLS1; PAO
35 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  interacts with  --  NOL
36 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  interacts with  --  NYC1
37 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  interacts with  --  ATNYE1; NYE1
38 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  interacts with  --  AT1G44000
39 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  interacts with  --  AT1G04620
40 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=1.04573) with  --  AT2G35490
41 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=0.984868) with  --  AT2G14880
42 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=0.914652) with  --  AT2G03420
43 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=0.800369) with  --  AT1G68660
44 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=1.09677) with  --  ISPF; MECPS
45 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=0.991156) with  --  AT3G17930
46 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=1.21724) with  --  AT3G12685
47 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=1.24341) with  --  AT4G10300
48 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has similar expression pattern (mutual information value=0.9755) with  --  THI1; THI4; TZ
49 AT3G52230  --  has similar expression pattern (mutual information value=0.917722) with  --  ACD2; ATRCCR  --  has product (in catalytic reaction)  --  Red chlorophyll catabolite
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