Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G29250
Type: Protein GRN ID: np24399 Name:
Annotation: NAD(P)-binding Rossmann-fold superfamily protein
Gene Locus: AT3G29250
Gene Expression (Affy ATH1 probeset): 257774_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800
3 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510
4 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42500
5 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800  --  has similar expression pattern (mutual information value=0.848887) with  --  AT1G14960
6 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800  --  has similar expression pattern (mutual information value=0.950319) with  --  AT5G23840
7 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800  --  has similar expression pattern (mutual information value=0.916872) with  --  AT5G23830
8 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800  --  has similar expression pattern (mutual information value=0.902054) with  --  CYP71A16
9 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800  --  has similar expression pattern (mutual information value=0.867223) with  --  CYP705A5; THAD; THAD1
10 AT3G29250  --  has similar expression pattern (mutual information value=0.841498) with  --  AT1G66800  --  has similar expression pattern (mutual information value=0.807155) with  --  AT5G47950
11 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=1.03835) with  --  TIP4;1
12 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.838036) with  --  ZIP3
13 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.975734) with  --  AT1G30870
14 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.985168) with  --  AT1G67330
15 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=1.03692) with  --  RCI3; RCI3A
16 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.903063) with  --  AT2G21100
17 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.977537) with  --  AT1G44970
18 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.955896) with  --  AtGH9C1; GH9C1
19 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.856688) with  --  AT1G18980
20 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.952507) with  --  AHP1
21 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=1.02763) with  --  AT3G25930
22 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.828455) with  --  AT3G22570
23 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=1.05133) with  --  ATXTH14; XTH14; XTR9
24 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.810669) with  --  AT4G26220
25 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.865031) with  --  AT4G30170
26 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.910716) with  --  AGP24; ATAGP24
27 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42180
28 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=1.1269) with  --  AT5G46890
29 AT3G29250  --  has similar expression pattern (mutual information value=1.02602) with  --  AT5G42510  --  has similar expression pattern (mutual information value=1.1269) with  --  AT5G46900
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact