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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G42940
Type: Protein GRN ID: np22484 Name:
Annotation: Predicted AT-hook DNA-binding family protein
Gene Locus: AT2G42940
Gene Expression (Affy ATH1 probeset): 265263_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G42940  --  interacts with  --  MSI5; NFC5
3 AT2G42940  --  interacts with  --  AT5G64780
4 AT2G42940  --  interacts with  --  AT5G62260
5 AT2G42940  --  interacts with  --  ATMTN1
6 AT2G42940  --  interacts with  --  FVE
7 AT2G42940  --  interacts with  --  AT5G64780  --  interacts with  --  AT5G65400
8 AT2G42940  --  interacts with  --  AT5G64780  --  interacts with  --  VPS9B
9 AT2G42940  --  interacts with  --  AT5G64780  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
10 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.989121) with  --  EDA3
11 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.932315) with  --  GDCH
12 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=1.03078) with  --  PTAC4; VIPP1
13 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.897251) with  --  CRB; CSP41B; HIP1.3
14 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.963276) with  --  AT2G04700
15 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.897607) with  --  AT2G05310
16 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.897607) with  --  AT4G13500
17 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.962231) with  --  NDH-O
18 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.844324) with  --  TCP3
19 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.950224) with  --  AT1G76450
20 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.851563) with  --  ATEXP5; ATEXPA5; ATHEXP ALPHA 1.4; EXP5; EXPA5
21 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.81615) with  --  HYR1
22 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.912981) with  --  LHCA2*1; LHCA6
23 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.908162) with  --  AT1G32080
24 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.938049) with  --  AT4G39970
25 AT2G42940  --  interacts with  --  AT5G62260  --  has similar expression pattern (mutual information value=0.938296) with  --  AT3G48200
26 AT2G42940  --  interacts with  --  AT5G62260  --  interacts with  --  RGA1
27 AT2G42940  --  interacts with  --  AT5G62260  --  interacts with  --  AT3G61310
28 AT2G42940  --  interacts with  --  AT5G62260  --  interacts with  --  AT4G17950
29 AT2G42940  --  interacts with  --  AT5G62260  --  interacts with  --  AT4G25320
30 AT2G42940  --  interacts with  --  AT5G62260  --  interacts with  --  AT2G45850
31 AT2G42940  --  interacts with  --  ATMTN1  --  interacts with  --  ATCBL2; CBL2
32 AT2G42940  --  interacts with  --  ATMTN1  --  interacts with  --  ATCBL3; CBL3
33 AT2G42940  --  interacts with  --  ATMTN1  --  has product (in catalytic reaction)  --  Adenine
34 AT2G42940  --  interacts with  --  ATMTN1  --  has product (in catalytic reaction)  --  MTR
35 AT2G42940  --  interacts with  --  ATMTN1  --  has product (in catalytic reaction)  --  5-Methylthio-D-ribose
36 AT2G42940  --  interacts with  --  FVE  --  interacts with  --  ATHDA5; HDA05; HDA5
37 AT2G42940  --  interacts with  --  FVE  --  interacts with  --  HDA09; HDA9
38 AT2G42940  --  interacts with  --  FVE  --  interacts with  --  ATHDA15; HDA15
39 AT2G42940  --  interacts with  --  FVE  --  interacts with  --  CBFS
40 AT2G42940  --  interacts with  --  FVE  --  interacts with  --  DDB1B
41 AT2G42940  --  interacts with  --  FVE  --  interacts with  --  DDB1A
42 AT2G42940  --  interacts with  --  FVE  --  is a member of  --  FPA family, transcription factor gene
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