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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G28020
Type: Protein GRN ID: np22206 Name:
Annotation: BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1); Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT2G28020
Gene Expression (Affy ATH1 probeset): 265571_s_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Catalytic chemical reaction
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060
3 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.842709) with  --  AT2G45520
4 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.815134) with  --  ROL5
5 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.800118) with  --  AT2G28230
6 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.873303) with  --  ATH4; ATTRX4
7 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.973055) with  --  AT1G17510
8 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.94848) with  --  AT2G43780
9 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.840891) with  --  AT1G69380
10 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.875017) with  --  AT1G06380
11 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.855792) with  --  AT3G07590
12 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=1.05467) with  --  AT3G05810
13 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.805926) with  --  AT3G09700
14 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.801787) with  --  AT4G01790
15 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.914292) with  --  AT4G26310
16 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=1.01086) with  --  AT3G55605
17 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.848218) with  --  AT3G62840
18 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.84307) with  --  AT5G09770
19 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.890281) with  --  AT5G39800
20 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.890281) with  --  AT5G40080
21 AT2G28020  --  has similar expression pattern (mutual information value=0.800118) with  --  AT5G16060  --  has similar expression pattern (mutual information value=0.824999) with  --  NRPB6A; NRPD6A; NRPE6A
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