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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G28780
Type: Protein GRN ID: np21616 Name:
Annotation: unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Gene Locus: AT2G28780
Gene Expression (Affy ATH1 probeset): 266222_at    
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G28780  --  is the target gene of  --  ath-miR395f
3 AT2G28780  --  is the target gene of  --  ath-miR395e
4 AT2G28780  --  is the target gene of  --  ath-miR395d
5 AT2G28780  --  is the target gene of  --  ath-miR395c
6 AT2G28780  --  is the target gene of  --  ath-miR395b
7 AT2G28780  --  is the target gene of  --  ath-miR395a
8 AT2G28780  --  is the target gene of  --  ath-miR395f  --  inhibit the expression of  --  APS4
9 AT2G28780  --  is the target gene of  --  ath-miR395f  --  inhibit the expression of  --  CCH/CHLH/GUN5
10 AT2G28780  --  is the target gene of  --  ath-miR395f  --  inhibit the expression of  --  AST68; SULTR2;1
11 AT2G28780  --  is the target gene of  --  ath-miR395f  --  inhibit the expression of  --  ATCSLG3; CSLG3
12 AT2G28780  --  is the target gene of  --  ath-miR395f  --  inhibit the expression of  --  AT4G23840
13 AT2G28780  --  is the target gene of  --  ath-miR395f  --  inhibit the expression of  --  AT1G50930
14 AT2G28780  --  is the target gene of  --  ath-miR395e  --  inhibit the expression of  --  APS3
15 AT2G28780  --  is the target gene of  --  ath-miR395e  --  inhibit the expression of  --  AT3G45630
16 AT2G28780  --  is the target gene of  --  ath-miR395e  --  inhibit the expression of  --  AT3G29078
17 AT2G28780  --  is the target gene of  --  ath-miR395e  --  inhibit the expression of  --  AT2G21230
18 AT2G28780  --  is the target gene of  --  ath-miR395e  --  inhibit the expression of  --  AT2G20463
19 AT2G28780  --  is the target gene of  --  ath-miR395e  --  inhibit the expression of  --  AT2G17787
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