Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATROPGEF4; RHS11; ROPGEF4
Type: Protein GRN ID: np20840 Name: ATROPGEF4; RHS11; ROPGEF4
Annotation: ATROPGEF4, ROPGEF4, RHS11 | RHO guanyl-nucleotide exchange factor 4
Gene Locus: AT2G45890
Gene Expression (Affy ATH1 probeset): 266913_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  ATROPGEF10; ROPGEF10
3 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B
4 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220
5 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  interacts with  --  PGR5
6 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  interacts with  --  ATLFNR2; FNR2
7 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  interacts with  --  PSAD-1
8 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  interacts with  --  ATFD2; FED A
9 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  interacts with  --  ATLFNR1; FNR1
10 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  interacts with  --  AT4G10080
11 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  PGRL1B  --  has similar expression pattern (mutual information value=0.882739) with  --  AT5G43260
12 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  ATRBL2; RBL2
13 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  AT2G43420
14 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  CPUORF7
15 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  AT4G38690
16 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  ATCESA3
17 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  AT4G32530
18 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  AT5G19570
19 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  AtSWEET5; AtVEX1; SWEET5
20 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  SEC61 BETA
21 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  AT2G29910
22 ATROPGEF4; RHS11; ROPGEF4  --  interacts with  --  AT4G34220  --  interacts with  --  ARAC6; ATRAC6; ATROP5; RAC2; RAC6; ROP5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact