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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G43880
Type: Protein GRN ID: np20261 Name:
Annotation: Pectin lyase-like superfamily protein
Gene Locus: AT2G43880
Gene Expression (Affy ATH1 probeset): 267222_at    
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G43880  --  interacts with  --  AT5G63930
3 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT4G27610
4 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT1G63110
5 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT4G38690
6 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  ATMLO2; MLO2; PMR2
7 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT2G28960
8 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT3G28040
9 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT5G10290
10 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT4G20450
11 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT3G61750
12 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT2G26730
13 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  CLI1; RPK2; TOAD2
14 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT2G41820
15 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  SCM; SRF9; SUB
16 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  BIR1
17 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  ATPLC2; PLC2
18 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT2G16250
19 AT2G43880  --  interacts with  --  AT5G63930  --  interacts with  --  AT4G23740
20 AT2G43880  --  interacts with  --  AT5G63930  --  has similar expression pattern (mutual information value=0.845713) with  --  ABCG37; ATPDR9; PDR9; PIS1
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