Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G40900
Type: Protein GRN ID: np18674 Name:
Annotation: nodulin MtN21 /EamA-like transporter family protein [TCDB:1.A.26.1]
Gene Locus: AT2G40900
Gene Expression (Affy ATH1 probeset): 245090_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G40900  --  interacts with  --  AT1G48210
3 AT2G40900  --  interacts with  --  ATGLR2.2; GLR2.2
4 AT2G40900  --  interacts with  --  ABCC4; ATMRP4; EST3; MRP4
5 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340
6 AT2G40900  --  has similar expression pattern (mutual information value=0.838828) with  --  ABCG14
7 AT2G40900  --  interacts with  --  AT1G48210  --  interacts with  --  AT5G14210
8 AT2G40900  --  interacts with  --  AT1G48210  --  interacts with  --  ABCD2
9 AT2G40900  --  interacts with  --  AT1G48210  --  interacts with  --  AT1G17200
10 AT2G40900  --  interacts with  --  AT1G48210  --  interacts with  --  AT4G16444
11 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.830641) with  --  CASP3
12 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.813574) with  --  PIP2;2; PIP2B
13 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.813574) with  --  PIP2;3; PIP2C; RD28
14 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.824354) with  --  GAMMA-TIP; GAMMA-TIP1; TIP1;1
15 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.853798) with  --  NRT1.9
16 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.855933) with  --  ATSBT5.2
17 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.932332) with  --  NRT1.5
18 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.889893) with  --  AT4G11190
19 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.816367) with  --  AT4G12520
20 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.816367) with  --  AT4G12510
21 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  has similar expression pattern (mutual information value=0.82746) with  --  ATPIP1; PIP1; PIP1;1; PIP1A
22 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  interacts with  --  AT3G29270
23 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  interacts with  --  AT3G10260
24 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  interacts with  --  BTI3; RTNLB4
25 AT2G40900  --  has similar expression pattern (mutual information value=0.984662) with  --  AT5G61340  --  interacts with  --  AT1G78100
26 AT2G40900  --  has similar expression pattern (mutual information value=0.838828) with  --  ABCG14  --  interacts with  --  ABCG11; AtABCG11; ATWBC11; COF1; DSO; WBC11
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact