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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G80040
Type: Protein GRN ID: np18362 Name:
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT1G80040
Gene Expression (Affy ATH1 probeset): 262057_at    
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G80040  --  interacts with  --  AT5G66720
3 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  ATSPP2; SPP2
4 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  AT3G27960
5 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  BOI; RING
6 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  LSU1
7 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  AT4G01090
8 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  AT5G66560
9 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  AT4G22250
10 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  ATHAM3; HAM3; LOM3
11 AT1G80040  --  interacts with  --  AT5G66720  --  interacts with  --  OBE1
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