Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G69250
Type: Protein GRN ID: np17286 Name:
Annotation: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Gene Locus: AT1G69250
Gene Expression (Affy ATH1 probeset): 260338_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3
3 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  interacts with  --  AtKIN14h; ATKP1; KP1
4 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  interacts with  --  GAPC; GAPC-1; GAPC1
5 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  interacts with  --  GAPC-2; GAPC2
6 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  interacts with  --  AT2G36460
7 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  interacts with  --  AT4G22240
8 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  has similar expression pattern (mutual information value=0.821078) with  --  EMB2811; RFC2
9 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  has similar expression pattern (mutual information value=0.937675) with  --  AT3G11250
10 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  has similar expression pattern (mutual information value=0.865003) with  --  MEE49
11 AT1G69250  --  has similar expression pattern (mutual information value=0.811271) with  --  ATVDAC3; VDAC3  --  has similar expression pattern (mutual information value=1.01257) with  --  ATPHB3; PHB3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact