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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G52320
Type: Protein GRN ID: np17251 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in 62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi - 2; Plants - 427; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Gene Locus: AT1G52320
Gene Expression (Affy ATH1 probeset): 259610_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030
3 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.954863) with  --  AT1G32810
4 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.842147) with  --  SUE3; VIP1
5 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.844782) with  --  AT3G09850
6 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.941641) with  --  AT5G04910
7 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.831644) with  --  ASG2
8 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.888022) with  --  AT5G16505
9 AT1G52320  --  has similar expression pattern (mutual information value=0.853047) with  --  AT3G10030  --  has similar expression pattern (mutual information value=0.869193) with  --  AT4G16440
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