Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G29980
Type: Protein GRN ID: np17227 Name:
Annotation: Protein of unknown function, DUF642
Gene Locus: AT1G29980
Gene Expression (Affy ATH1 probeset): 260028_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G29980  --  interacts with  --  NAPRT2
3 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  ATRZ-1A; RZ-1A
4 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  AT4G32750
5 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  NDF4
6 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  BIGYIN; FIS1A
7 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  AT5G52970
8 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  RPL27A; RPL27AB
9 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  AT1G31870
10 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  ATRAB-A2A; ATRAB11C; ATRABA2A; RAB-A2A; RAB11c
11 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  AT1G12310
12 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  AT1G55270
13 AT1G29980  --  interacts with  --  NAPRT2  --  interacts with  --  AT1G79390
14 AT1G29980  --  interacts with  --  NAPRT2  --  has product (in catalytic reaction)  --  Nicotinate D-ribonucleotide
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact