Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node CLO; GFA1; MEE5
Type: Protein GRN ID: np16969 Name: CLO; GFA1; MEE5
Annotation: MEE5 | Ribosomal protein S5/Elongation factor G/III/V family protein
Gene Locus: AT1G06220
Gene Expression (Affy ATH1 probeset): 260786_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.817182) with  --  AT4G02820
3 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.871652) with  --  MSI3; NFC3
4 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.861944) with  --  CYP71
5 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.816859) with  --  AtSAP130ab; SAP130b
6 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.816859) with  --  AtSAP130a; SAP130a
7 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.836699) with  --  ATRANGAP1; RANGAP1
8 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.897105) with  --  ATUBA2; UBA 2
9 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.961938) with  --  ATTIP49A; RIN1
10 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.817182) with  --  AT4G02820  --  interacts with  --  AT3G53630
11 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.817182) with  --  AT4G02820  --  has similar expression pattern (mutual information value=0.863044) with  --  ATRRP4; RRP4
12 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.817182) with  --  AT4G02820  --  has similar expression pattern (mutual information value=0.901513) with  --  AT1G06380
13 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.871652) with  --  MSI3; NFC3  --  interacts with  --  DDB1A
14 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.861944) with  --  CYP71  --  has product (in catalytic reaction)  --  Peptidylproline (omega=0)
15 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.836699) with  --  ATRANGAP1; RANGAP1  --  interacts with  --  AT3G50910
16 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.836699) with  --  ATRANGAP1; RANGAP1  --  interacts with  --  WIT1
17 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.836699) with  --  ATRANGAP1; RANGAP1  --  has similar expression pattern (mutual information value=0.806029) with  --  AtLa1; La1
18 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.836699) with  --  ATRANGAP1; RANGAP1  --  has similar expression pattern (mutual information value=0.830186) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
19 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.897105) with  --  ATUBA2; UBA 2  --  has similar expression pattern (mutual information value=0.810853) with  --  AT2G40660
20 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.897105) with  --  ATUBA2; UBA 2  --  has similar expression pattern (mutual information value=0.831997) with  --  AT2G40430
21 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.897105) with  --  ATUBA2; UBA 2  --  has similar expression pattern (mutual information value=0.840169) with  --  AT3G16310
22 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.897105) with  --  ATUBA2; UBA 2  --  has similar expression pattern (mutual information value=0.855878) with  --  AT4G05400
23 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.961938) with  --  ATTIP49A; RIN1  --  interacts with  --  FLA; FRI
24 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.961938) with  --  ATTIP49A; RIN1  --  interacts with  --  FES1
25 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.961938) with  --  ATTIP49A; RIN1  --  interacts with  --  SUF4
26 CLO; GFA1; MEE5  --  has similar expression pattern (mutual information value=0.961938) with  --  ATTIP49A; RIN1  --  interacts with  --  AT2G30120
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact