Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT1G15590

Type: Protein	GRN ID: np16724	Name:
Annotation:	BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G80400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus:	AT1G15590
Gene Expression (Affy ATH1 probeset):	261759_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT1G15590 -- is the target gene of -- ath-miR857
3	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- AT5G58390
4	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- ATCCD8; CCD8; MAX4
5	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- LAC7
6	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- AT2G47850
7	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- AT2G07540
8	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- AT1G50820
9	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- AT1G47360
10	AT1G15590 -- is the target gene of -- ath-miR857 -- inhibit the expression of -- ATBPC2; BBR/BPC2; BPC2

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

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