Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATVPS34; PI3K; VPS34
Type: Protein GRN ID: np16723 Name: ATVPS34; PI3K; VPS34
Annotation: ATVPS34, VPS34, PI3K | vacuolar protein sorting 34 [EC:2.7.1.137]
Gene Locus: AT1G60490
Gene Expression (Affy ATH1 probeset): 264927_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATVPS34; PI3K; VPS34  --  has product (in catalytic reaction)  --  1-Phosphatidyl-1D-myo-inositol 3-phosphate
3 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380
4 ATVPS34; PI3K; VPS34  --  has product (in catalytic reaction)  --  1-Phosphatidyl-1D-myo-inositol 3-phosphate  --  has product (in catalytic reaction)  --  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
5 ATVPS34; PI3K; VPS34  --  has product (in catalytic reaction)  --  1-Phosphatidyl-1D-myo-inositol 3-phosphate  --  is product (in catalytic reaction) of  --  1-Phosphatidyl-D-myo-inositol
6 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.936275) with  --  AT2G38410
7 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.812581) with  --  AT2G46260
8 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.89161) with  --  ATCDC5; ATMYBCDC5; CDC5
9 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.809528) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34
10 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.817655) with  --  PYM
11 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.923584) with  --  ARI5; ATARI5
12 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.941889) with  --  ATBET10; BET10
13 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.834809) with  --  AtMTM1; MTM1
14 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.827498) with  --  AT4G02480
15 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.839856) with  --  AT4G13030
16 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.88967) with  --  ACBP2
17 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.924725) with  --  AT5G42560
18 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.912421) with  --  AT5G63640
19 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.968932) with  --  AT5G24870
20 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.803382) with  --  AT1G48840
21 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.908699) with  --  AT5G04240
22 ATVPS34; PI3K; VPS34  --  interacts with  --  AT4G29380  --  has similar expression pattern (mutual information value=0.837119) with  --  ATRCY1; RCY1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab