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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G48580
Type: Protein GRN ID: np16697 Name:
Annotation: unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Gene Locus: AT1G48580
Gene Expression (Affy ATH1 probeset): 261302_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G48580  --  has similar expression pattern (mutual information value=0.83832) with  --  AT2G13690
3 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3
4 AT1G48580  --  has similar expression pattern (mutual information value=0.83832) with  --  AT2G13690  --  has similar expression pattern (mutual information value=0.838189) with  --  AT1G63470
5 AT1G48580  --  has similar expression pattern (mutual information value=0.83832) with  --  AT2G13690  --  has similar expression pattern (mutual information value=0.84242) with  --  AT4G03090
6 AT1G48580  --  has similar expression pattern (mutual information value=0.83832) with  --  AT2G13690  --  has similar expression pattern (mutual information value=0.931655) with  --  AT4G22000
7 AT1G48580  --  has similar expression pattern (mutual information value=0.83832) with  --  AT2G13690  --  has similar expression pattern (mutual information value=0.835885) with  --  AT1G48900
8 AT1G48580  --  has similar expression pattern (mutual information value=0.83832) with  --  AT2G13690  --  is the target gene of  --  ath-miR773b-3p
9 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.986778) with  --  AT2G18520
10 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.816698) with  --  RIP3
11 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=1.01708) with  --  AT1G60770
12 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=1.02639) with  --  AT1G09590
13 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=1.02639) with  --  AT1G09690
14 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.815627) with  --  AT2G21290
15 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.849018) with  --  AT1G11240
16 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.929524) with  --  ATPRMT10; PRMT10
17 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.924278) with  --  NFD5
18 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.927914) with  --  AT3G02760
19 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.833191) with  --  AT3G17160
20 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.903942) with  --  AT3G24080
21 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.820145) with  --  AT2G34040
22 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=1.0373) with  --  AT3G12390
23 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.891126) with  --  AT3G51270
24 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.998241) with  --  AT5G05210
25 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.917838) with  --  ATCBP20
26 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.869437) with  --  PSL4
27 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.943076) with  --  AT5G57120
28 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.941081) with  --  PNM1
29 AT1G48580  --  has similar expression pattern (mutual information value=0.851461) with  --  NACA3  --  has similar expression pattern (mutual information value=0.815458) with  --  ATDI21; DI21
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