Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node Hop1
Type: Protein GRN ID: np15968 Name: Hop1
Annotation: Hop1 | stress-inducible protein, putative [TCDB:9.A.10.1]
Gene Locus: AT1G12270
Gene Expression (Affy ATH1 probeset): 259519_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160
3 Hop1  --  has similar expression pattern (mutual information value=0.813407) with  --  CHR17
4 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900
5 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.809465) with  --  ARF12
6 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.923481) with  --  AT1G15910
7 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.923481) with  --  AT4G00380
8 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.883231) with  --  ATPC2
9 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.840503) with  --  AT3G13190
10 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.811101) with  --  AT3G30380
11 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.833191) with  --  NACA3
12 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.880416) with  --  AT5G55670
13 Hop1  --  has similar expression pattern (mutual information value=1.09959) with  --  AT3G17160  --  has similar expression pattern (mutual information value=0.803979) with  --  AT5G04320
14 Hop1  --  has similar expression pattern (mutual information value=0.813407) with  --  CHR17  --  interacts with  --  HB-1
15 Hop1  --  has similar expression pattern (mutual information value=0.813407) with  --  CHR17  --  has similar expression pattern (mutual information value=0.889636) with  --  CENP-C; CENP-C
16 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.928251) with  --  AT2G38420
17 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.876455) with  --  AT2G40650
18 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.818918) with  --  AT2G18520
19 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.923002) with  --  ATMAP70-3; MAP70-3
20 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.831396) with  --  AT5G60430
21 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.831396) with  --  PRORP2
22 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.873786) with  --  AT1G55460
23 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.835885) with  --  AT2G13690
24 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.891913) with  --  DRP3B
25 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.829053) with  --  AT1G52730
26 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.949494) with  --  AT1G15940
27 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=1.09545) with  --  AT3G19650
28 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.863869) with  --  CPK33
29 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.808773) with  --  AT3G44690
30 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.897461) with  --  AT5G18950
31 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.95523) with  --  ATCBP20
32 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=1.12649) with  --  AT5G53800
33 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.835218) with  --  AT5G25060
34 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.858187) with  --  AT5G16950
35 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=0.883588) with  --  SMP2
36 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  has similar expression pattern (mutual information value=1.00624) with  --  AT5G19960
37 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  transport  --  Sugar phosphate
38 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  transport  --  D-Glucose 6-phosphate
39 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  transport  --  Thiamin diphosphate
40 Hop1  --  has similar expression pattern (mutual information value=0.898481) with  --  AT1G48900  --  transport  --  UDP-alpha-D-galactose
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact