Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G30720
Type: Protein GRN ID: np15295 Name:
Annotation: FAD-binding Berberine family protein
Gene Locus: AT1G30720
Gene Expression (Affy ATH1 probeset): 263216_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380
3 AT1G30720  --  has similar expression pattern (mutual information value=0.835366) with  --  AT2G39410
4 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610
5 AT1G30720  --  has similar expression pattern (mutual information value=0.822419) with  --  AT3G18560
6 AT1G30720  --  has similar expression pattern (mutual information value=0.879196) with  --  AT-HSFA7A; HSFA7A
7 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.87107) with  --  AT2G28960
8 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.885995) with  --  AT1G30730
9 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.836647) with  --  ATWRKY65; WRKY65
10 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.899532) with  --  ATWRKY9; WRKY9
11 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.813544) with  --  AT5G43520
12 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.847357) with  --  AT5G44380
13 AT1G30720  --  has similar expression pattern (mutual information value=0.885995) with  --  AT2G44380  --  has similar expression pattern (mutual information value=0.884392) with  --  AT1G51850
14 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.881338) with  --  ATMYB38; BIT1; MYB38; RAX2
15 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.84307) with  --  CYP705A27
16 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.805622) with  --  ACT8; FIZ1
17 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.965422) with  --  GH3.17
18 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.808364) with  --  AHL1; ATAHL1
19 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.880845) with  --  AT4G35380
20 AT1G30720  --  has similar expression pattern (mutual information value=0.840001) with  --  AT2G43610  --  has similar expression pattern (mutual information value=0.991033) with  --  ACAT2; EMB1276
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact