Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G16860
Type: Protein GRN ID: np15284 Name:
Annotation: Ubiquitin-specific protease family C19-related protein
Gene Locus: AT1G16860
Gene Expression (Affy ATH1 probeset): 256116_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G16860  --  interacts with  --  AT3G25805
3 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.29666) with  --  EDA3
4 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.27665) with  --  LIP2
5 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.25556) with  --  ATSULA; GC1; SULA
6 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.21726) with  --  AT1G04420
7 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.39689) with  --  AT2G36145
8 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.28693) with  --  LPA3
9 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.24853) with  --  EMB3105
10 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.02132) with  --  AT1G11430
11 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.08068) with  --  AT1G01970
12 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.24749) with  --  AT1G14270
13 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.40837) with  --  AT3G08920
14 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.0931) with  --  AT3G04550
15 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.09393) with  --  PLSP1
16 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.31728) with  --  AT3G29185
17 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.23522) with  --  AT3G15190
18 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.23889) with  --  CP33; PDE322
19 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.26615) with  --  FdC1
20 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.29819) with  --  AT4G11175
21 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.22209) with  --  ATRBP31; ATRBP33; CP31; RBP31
22 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=0.9679) with  --  AT4G39040
23 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.21943) with  --  AT3G60370
24 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.1707) with  --  EMB3137
25 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.12889) with  --  CRR7
26 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.29747) with  --  AT5G51110
27 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.12876) with  --  LPA2
28 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.02005) with  --  APO2; emb1629
29 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=0.820149) with  --  AT5G59610
30 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.11938) with  --  AT5G62840
31 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.26108) with  --  AT5G14910
32 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=0.910338) with  --  AT4G36530
33 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.20556) with  --  AT5G28750
34 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=0.86935) with  --  CYP97B3
35 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=1.34146) with  --  AT2G33180
36 AT1G16860  --  interacts with  --  AT3G25805  --  has similar expression pattern (mutual information value=0.934041) with  --  YAB5
37 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  BOI; RING
38 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ALE2
39 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT5G08050
40 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  PEX11B
41 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ATRBOHC; RBOHC; RHD2
42 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ALMT1; ATALMT1
43 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ATHLECRK; HLECRK; LECRK1
44 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ATGPX5; GPX5; MEE42
45 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ATDAD1
46 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT1G26180
47 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT3G13950
48 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT2G16250
49 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT5G59700
50 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  CRK31
51 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT3G46370
52 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT2G43690
53 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT1G04360
54 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT4G03820
55 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT3G14860
56 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ATMLO9; MLO9
57 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT2G04080
58 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT2G38330
59 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  ALF5
60 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT4G04480
61 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT1G69460
62 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT5G59740
63 AT1G16860  --  interacts with  --  AT3G25805  --  interacts with  --  AT3G27200
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact