Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT1G49870

Type: Protein	GRN ID: np14961	Name:
Annotation:	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 6518 Blast hits to 5022 proteins in 522 species: Archae - 49; Bacteria - 635; Metazoa - 3264; Fungi - 379; Plants - 242; Viruses - 9; Other Eukaryotes - 1940 (source: NCBI BLink).
Gene Locus:	AT1G49870
Gene Expression (Affy ATH1 probeset):	259815_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

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Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT1G49870 -- is the target gene of -- ath-miR399f
3	AT1G49870 -- is the target gene of -- ath-miR399f -- inhibit the expression of -- ATUBC24; PHO2; UBC24
4	AT1G49870 -- is the target gene of -- ath-miR399f -- inhibit the expression of -- AT2G26900
5	AT1G49870 -- is the target gene of -- ath-miR399f -- is regulated by -- ATIPS1; IPS1
6	AT1G49870 -- is the target gene of -- ath-miR399f -- is regulated by -- PHR1; UVR2

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