Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G22930
Type: Protein GRN ID: np14544 Name:
Annotation: T-complex protein 11 [TCDB:9.A.14.1]
Gene Locus: AT1G22930
Gene Expression (Affy ATH1 probeset): 264772_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950
3 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=1.08987) with  --  AT2G25830
4 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.958763) with  --  AT2G17972
5 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.996521) with  --  CH-CPN60A; CPN60A; SLP
6 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.815487) with  --  ALDH7B4
7 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.970342) with  --  AT1G56050
8 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.99274) with  --  AT1G36390
9 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.94281) with  --  AT3G59980
10 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=1.18786) with  --  AT5G11450
11 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=1.10182) with  --  ATCPN21; CHCPN10; CPN10; CPN20; CPN21
12 AT1G22930  --  has similar expression pattern (mutual information value=0.818754) with  --  AT2G41950  --  has similar expression pattern (mutual information value=0.968847) with  --  SVR7
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab