Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT1G30475

Type: Protein	GRN ID: np14163	Name:
Annotation:	BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 148 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 63; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Gene Locus:	AT1G30475
Gene Expression (Affy ATH1 probeset):

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT1G30475 -- interacts with -- AT2G20820
3	AT1G30475 -- interacts with -- AT1G48450
4	AT1G30475 -- interacts with -- AT2G20820 -- has similar expression pattern (mutual information value=0.881401) with -- AT1G67350
5	AT1G30475 -- interacts with -- AT2G20820 -- has similar expression pattern (mutual information value=0.979953) with -- AT3G47833
6	AT1G30475 -- interacts with -- AT1G48450 -- interacts with -- NTRC
7	AT1G30475 -- interacts with -- AT1G48450 -- has similar expression pattern (mutual information value=0.804322) with -- AT1G12250
8	AT1G30475 -- interacts with -- AT1G48450 -- has similar expression pattern (mutual information value=0.922442) with -- ATYLMG1-2; YLMG1-2
9	AT1G30475 -- interacts with -- AT1G48450 -- has similar expression pattern (mutual information value=0.946371) with -- SIG4; SIGD

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