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Location:  Home > Details for node AT1G54890
Type: Protein GRN ID: np13703 Name:
Annotation: Late embryogenesis abundant (LEA) protein-related
Gene Locus: AT1G54890
Gene Expression (Affy ATH1 probeset): 256349_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050
3 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370
4 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530
5 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340
6 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.07675) with  --  AT2G34910
7 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=0.923018) with  --  AT2G39110
8 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.02281) with  --  ATCNGC14; CNGC14
9 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=0.880015) with  --  AT2G17080
10 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=0.816094) with  --  AT2G31390
11 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.06666) with  --  ATFUT6; FUT6
12 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=0.860029) with  --  AT1G14220
13 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.27387) with  --  AT1G50060
14 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=0.992588) with  --  ATGSTU28; GSTU28
15 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.26935) with  --  ATMLP-300B; MEE36; MLP-300B
16 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=0.952852) with  --  IDI2; IPIAT1; IPP2
17 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.03228) with  --  AT3G15240
18 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.03539) with  --  AT5G10130
19 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.03357) with  --  AT5G14150
20 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  has similar expression pattern (mutual information value=1.03069) with  --  GMD1
21 AT1G54890  --  has similar expression pattern (mutual information value=0.815416) with  --  AT1G52050  --  is the target gene of  --  ath-miR846
22 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=1.06129) with  --  ZIP3
23 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.832532) with  --  NCRK
24 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=1.13626) with  --  AT1G52070
25 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=1.26695) with  --  BGLU35; TGG5
26 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=1.26695) with  --  BGLU34; TGG4
27 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.93857) with  --  AGL12; XAL1
28 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=1.16094) with  --  AT1G06090
29 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=1.16094) with  --  AT1G06120
30 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.859341) with  --  CYP87A2
31 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.929293) with  --  AT4G28650
32 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.914475) with  --  AT4G31320
33 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.849842) with  --  AT3G54770
34 AT1G54890  --  has similar expression pattern (mutual information value=0.803807) with  --  AT5G54370  --  has similar expression pattern (mutual information value=0.881069) with  --  BCCP2; CAC1-B
35 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=0.822654) with  --  AT2G47140
36 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=1.0642) with  --  AT2G21045
37 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=0.803704) with  --  AT3G06460
38 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=0.934864) with  --  LBD13
39 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=0.96261) with  --  AT5G04970
40 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=0.833544) with  --  AT5G38550
41 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=0.833544) with  --  AT5G38540
42 AT1G54890  --  has similar expression pattern (mutual information value=0.845336) with  --  AT5G60530  --  has similar expression pattern (mutual information value=1.06996) with  --  AT5G40510
43 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340  --  has similar expression pattern (mutual information value=1.1835) with  --  AGP30; ATAGP30
44 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340  --  has similar expression pattern (mutual information value=0.873176) with  --  AT1G33800
45 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340  --  has similar expression pattern (mutual information value=0.907908) with  --  pin2/AGR
46 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340  --  has similar expression pattern (mutual information value=0.839251) with  --  LCR74; PDF2.5
47 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340  --  has similar expression pattern (mutual information value=0.992172) with  --  sks15
48 AT1G54890  --  has similar expression pattern (mutual information value=0.832777) with  --  AT5G62340  --  has similar expression pattern (mutual information value=1.02302) with  --  AT1G56680
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