Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node LPA19; Psb27-H1
Type: Protein GRN ID: np13577 Name: LPA19; Psb27-H1
Annotation: LPA19, Psb27-H1 | photosystem II 11 kDa protein-related
Gene Locus: AT1G05385
Gene Expression (Affy ATH1 probeset): 261388_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3
3 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD
4 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490
5 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.80092) with  --  AT2G23390
6 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.865577) with  --  iam hyd
7 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=1.08398) with  --  AT1G76110
8 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.969567) with  --  AT1G12250
9 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.998664) with  --  ATHPR1; HPR
10 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.816419) with  --  NOL
11 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=1.00511) with  --  G6PD1
12 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.831869) with  --  AT5G44520
13 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=1.01367) with  --  ATFRO6; FRO6; FRO6
14 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=1.01367) with  --  ATFRO7; FRO7
15 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.804174) with  --  ATCNFU3; NFU3  --  has similar expression pattern (mutual information value=0.844034) with  --  HCF164
16 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.883986) with  --  SCPL8; SNG1
17 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.946371) with  --  AT1G48450
18 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.964191) with  --  PIFI
19 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.846291) with  --  CCL
20 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=1.04427) with  --  AT3G15900
21 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.803517) with  --  CYP71B19
22 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.803517) with  --  CYP71B20
23 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.830355) with  --  AT3G26580
24 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.958976) with  --  AT3G23700
25 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.851476) with  --  AT3G23760
26 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.890146) with  --  CHUP1
27 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=1.08893) with  --  AT3G20680
28 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.980372) with  --  AT4G32340
29 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=1.04346) with  --  ATSSL4; SSL4
30 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.914903) with  --  AT3G62550
31 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.892756) with  --  AT5G02160
32 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.948862) with  --  crr1
33 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.875633) with  --  SIG4; SIGD  --  has similar expression pattern (mutual information value=0.825658) with  --  AT1G73470
34 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.36242) with  --  AT2G26340
35 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.843493) with  --  ALB3
36 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.19832) with  --  PSAE-2
37 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.26632) with  --  PSB27
38 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.1464) with  --  ATGPX1; GPX1
39 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.40288) with  --  AT2G21960
40 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.58066) with  --  AT1G73655
41 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.86699) with  --  AT1G64355
42 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.07209) with  --  AT1G28150
43 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.07443) with  --  AT3G15690
44 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.4261) with  --  OHP2
45 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.819502) with  --  AT4G04340
46 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.803339) with  --  AT4G26555
47 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.11329) with  --  AT4G35760
48 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.36655) with  --  AT3G56650
49 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.890466) with  --  ATCCD1; ATNCED1; CCD1; NCED1
50 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.930177) with  --  WCRKC1
51 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=0.811257) with  --  AT5G16660
52 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.23114) with  --  FTRA2
53 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.61953) with  --  AT1G67700
54 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  has similar expression pattern (mutual information value=1.17963) with  --  AT2G26500
55 LPA19; Psb27-H1  --  has similar expression pattern (mutual information value=0.85411) with  --  AT5G53490  --  transport  --  Phospholipid
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact