Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node LBD4
Type: Protein GRN ID: np13148 Name: LBD4
Annotation: LBD4 | LOB domain-containing protein 4
Gene Locus: AT1G31320
Transcription factor /
transcriptional regulator:		 transcription factor family AS2-LOB
Gene Expression (Affy ATH1 probeset): 257467_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 LBD4  --  interacts with  --  LBD13
3 LBD4  --  interacts with  --  LBD13  --  interacts with  --  ATGSK1; ATSK2-3; ATSK22; BIL2; GSK1; SK22
4 LBD4  --  interacts with  --  LBD13  --  interacts with  --  AS2
5 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.859491) with  --  AT1G05280
6 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=1.00294) with  --  AT3G15240
7 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.967608) with  --  AT4G28650
8 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.892158) with  --  AT4G31320
9 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.84895) with  --  WIH3
10 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.914934) with  --  AT5G14150
11 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.8115) with  --  AT5G38550
12 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.8115) with  --  AT5G38540
13 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.829153) with  --  pin2/AGR
14 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.934864) with  --  AT5G60530
15 LBD4  --  interacts with  --  LBD13  --  has similar expression pattern (mutual information value=0.899397) with  --  AT5G62340
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact