Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G25320
Type: Protein GRN ID: np13073 Name:
Annotation: Leucine-rich repeat protein kinase family protein
Gene Locus: AT1G25320
Gene Expression (Affy ATH1 probeset): 245644_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G25320  --  interacts with  --  DEI1; PAS1
3 AT1G25320  --  interacts with  --  GAMYB33
4 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.829676) with  --  AT1G60900
5 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.829676) with  --  AT1G60830
6 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.884623) with  --  ATRX; CHR20
7 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.82533) with  --  AT4G11560
8 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.805142) with  --  ATGSTT2; GST10B; GSTT2
9 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.805142) with  --  ATGSTT3; GST10C; GSTT3
10 AT1G25320  --  interacts with  --  DEI1; PAS1  --  has similar expression pattern (mutual information value=0.856852) with  --  AT5G53800
11 AT1G25320  --  interacts with  --  GAMYB33  --  regulates the expression of   --  LFY
12 AT1G25320  --  interacts with  --  GAMYB33  --  is a member of  --  MYBFAMILY, transcription factor gene
13 AT1G25320  --  interacts with  --  GAMYB33  --  interacts with  --  CRK40
14 AT1G25320  --  interacts with  --  GAMYB33  --  is the target gene of  --  ath-miR319c
15 AT1G25320  --  interacts with  --  GAMYB33  --  is the target gene of  --  ath-miR159c
16 AT1G25320  --  interacts with  --  GAMYB33  --  is the target gene of  --  ath-miR319b
17 AT1G25320  --  interacts with  --  GAMYB33  --  is the target gene of  --  ath-miR319a
18 AT1G25320  --  interacts with  --  GAMYB33  --  is the target gene of  --  ath-miR159b
19 AT1G25320  --  interacts with  --  GAMYB33  --  is the target gene of  --  ath-miR159a
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact