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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G27900
Type: Protein GRN ID: np12770 Name:
Annotation: RNA helicase family protein [EC:3.6.4.13]
Gene Locus: AT1G27900
Gene Expression (Affy ATH1 probeset): 259597_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255
3 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G23910
4 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.869261) with  --  AT2G16860
5 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.915313) with  --  ftsh10
6 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.805319) with  --  AT1G06210
7 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.806946) with  --  NF-YC10
8 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.813231) with  --  AT3G15180
9 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.891253) with  --  AT3G42860
10 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.803285) with  --  AT3G48210
11 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.822483) with  --  AT5G11350
12 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.926868) with  --  ATGSTT2; GST10B; GSTT2
13 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.926868) with  --  ATGSTT3; GST10C; GSTT3
14 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=0.882257) with  --  AT5G49880
15 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G24255  --  has similar expression pattern (mutual information value=1.0058) with  --  SMU2
16 AT1G27900  --  has similar expression pattern (mutual information value=0.852443) with  --  AT3G23910  --  interacts with  --  ATBRK1; BRK1; HSPC300
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