Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G65450
Type: Protein GRN ID: np10892 Name:
Annotation: HXXXD-type acyl-transferase family protein
Gene Locus: AT1G65450
Gene Expression (Affy ATH1 probeset): 264163_at    264160_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370
3 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=0.990735) with  --  CRB; CSP41B; HIP1.3
4 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=0.941828) with  --  ATCYP38; CYP38
5 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=1.02524) with  --  ATPPT2; PPT2
6 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=0.821213) with  --  LTP6
7 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=0.935788) with  --  AT3G21950
8 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=0.98163) with  --  AT4G39970
9 AT1G65450  --  has similar expression pattern (mutual information value=0.906917) with  --  AT5G33370  --  has similar expression pattern (mutual information value=0.820187) with  --  AT5G48490
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact