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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G22860
Type: Protein GRN ID: np10471 Name:
Annotation: Vacuolar sorting protein 39
Gene Locus: AT1G22860
Gene Expression (Affy ATH1 probeset): 264776_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890
3 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=1.02623) with  --  CRWN1; LINC1
4 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=0.803252) with  --  ATCDC5; ATMYBCDC5; CDC5
5 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=0.808091) with  --  VPS35B
6 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=0.808922) with  --  ARF12
7 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=0.820625) with  --  AT1G06840
8 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=0.846507) with  --  AT5G44080
9 AT1G22860  --  has similar expression pattern (mutual information value=0.850017) with  --  AT1G02890  --  has similar expression pattern (mutual information value=0.840061) with  --  AT5G17440
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