Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G21140
Type: Protein GRN ID: np10139 Name:
Annotation: Vacuolar iron transporter (VIT) family protein [TCDB:2.A.30.2] [TCDB:2.A.30.4] [TCDB:2.A.30.5] [TCDB:2.A.30.6]
Gene Locus: AT1G21140
Gene Expression (Affy ATH1 probeset): 261448_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G21140  --  interacts with  --  AT4G31430
3 AT1G21140  --  interacts with  --  AT4G31430  --  interacts with  --  AtTic22-IV; Tic22-IV
4 AT1G21140  --  interacts with  --  AT4G31430  --  interacts with  --  PRA1.A1
5 AT1G21140  --  interacts with  --  AT4G31430  --  interacts with  --  ATSPX1; SPX1
6 AT1G21140  --  interacts with  --  AT4G31430  --  interacts with  --  AT5G41520
7 AT1G21140  --  interacts with  --  AT4G31430  --  interacts with  --  AT4G22720
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact