Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G54410
Type: Protein GRN ID: np10029 Name:
Annotation: dehydrin family protein
Gene Locus: AT1G54410
Gene Expression (Affy ATH1 probeset): 262958_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G54410  --  interacts with  --  AT1G08590
3 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT3G03210
4 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT5G47180
5 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATMAPR3; ATMP2; MAPR3; MSBP2
6 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATPLC2; PLC2
7 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATH3; ATTRX3; ATTRXH3; TRX3; TRXH3
8 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT3G57220
9 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT3G44010
10 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT2G37660
11 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  CAB4; LHCA4
12 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT5G19120
13 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  PSBR
14 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATSUN1; SUN1
15 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT2G29360
16 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  CP5
17 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  LHB1B1; LHCB1.4
18 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT3G60245
19 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT2G31710
20 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATHB-2; ATHB2; HAT4; HB-2
21 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATCPK5; CPK5
22 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT3G29240
23 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  LHCA1
24 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  FEI1
25 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  ATCHX19; CHX19
26 AT1G54410  --  interacts with  --  AT1G08590  --  interacts with  --  AT5G62710
27 AT1G54410  --  interacts with  --  AT1G08590  --  has similar expression pattern (mutual information value=0.839332) with  --  AT5G14690
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact