Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G50950
Type: Protein GRN ID: np10016 Name:
Annotation: Thioredoxin protein with domain of unknown function (DUF1692)
Gene Locus: AT1G50950
Gene Expression (Affy ATH1 probeset): 256210_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G50950  --  interacts with  --  AT3G07680
3 AT1G50950  --  has similar expression pattern (mutual information value=0.862704) with  --  TRFL3
4 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT1G79390
5 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT1G52550
6 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT5G47180
7 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  ATNRAMP2; NRAMP2
8 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT4G01450
9 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT4G22790
10 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT1G23300
11 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT5G17700
12 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT1G28610
13 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT2G43260
14 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  ATEXO70B2; EXO70B2
15 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AT1G75180
16 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  CYP71B21
17 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  ABCI10; ATNAP13; EMB2751
18 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  CDKB2;1
19 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  PDLP3
20 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  ATRAB-F2A; ATRAB5A; ATRABF2A; RAB-F2A; RAB5A; RABF2A; RHA1
21 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  AtMAPR5; ATMP1; MSBP1
22 AT1G50950  --  interacts with  --  AT3G07680  --  interacts with  --  GONST5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact