Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node JAZ12
Type: Protein GRN ID: np06080 Name: JAZ12
Annotation: JAZ12, TIFY3B | jasmonate-zim-domain protein 12
Gene Locus: AT5G20900
Transcription factor /
transcriptional regulator:
transcription factor family TIFY
References:
  • Gfeller A, Liechti R, Farmer EE. Arabidopsis jasmonate signaling pathway. Sci Signal. 2010 Feb 16;3(109):cm4. doi: 10.1126/scisignal.3109cm4. Review. PubMed PMID: 20159850.
 
Pathways: Jasmonates 
Gene Expression (Affy ATH1 probeset): 246161_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 JAZ12  --  interacts with  --  MYC4
3 JAZ12  --  interacts with  --  MYC3
4 JAZ12  --  interacts with  --  ATMYC2
5 JAZ12  --  regulates the expression of   --  NINJA
6 JAZ12  --  is a member of  --  JAI3 family107, transcription factor gene
7 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  PFT1
8 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  EIL1
9 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  EIN3
10 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  ATMYB122; MYB122
11 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  ATMYB34; ATR1; MYB34
12 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  AtMYB28; HAG1; MYB28; PMG1
13 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  ATMYB29; MYB29; PMG2
14 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
15 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  JAZ11
16 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  JAZ7
17 JAZ12  --  interacts with  --  MYC4  --  interacts with  --  JAI3
18 JAZ12  --  interacts with  --  MYC3  --  interacts with  --  HY5
19 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  ATTPS11; ATTPSB; TPS11; TPS11
20 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  ATTPS21; TPS21
21 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  SPA1
22 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  PR1 family109, coding gene
23 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  ATRD22; RD22
24 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  RBCS1A
25 JAZ12  --  interacts with  --  ATMYC2  --  regulates the expression of   --  AB140; CAB1; CAB140; LHCB1.3
26 JAZ12  --  interacts with  --  ATMYC2  --  is regulated by  --  RGA1
27 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  RGL3
28 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  RGL2
29 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  RGL
30 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  CCH/CHLH/GUN5
31 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  ATSWI3B?
32 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  TIC
33 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  ARD1; ATARD1
34 JAZ12  --  interacts with  --  ATMYC2  --  interacts with  --  AHP5
35 JAZ12  --  interacts with  --  ATMYC2  --  is a member of  --  AtMYC2 family108, transcription factor gene
36 JAZ12  --  regulates the expression of   --  NINJA  --  interacts with  --  TIFY8
37 JAZ12  --  regulates the expression of   --  NINJA  --  interacts with  --  JAZ8
38 JAZ12  --  regulates the expression of   --  NINJA  --  interacts with  --  JAZ10
39 JAZ12  --  regulates the expression of   --  NINJA  --  interacts with  --  JAZ5
40 JAZ12  --  regulates the expression of   --  NINJA  --  interacts with  --  JAZ1
41 JAZ12  --  regulates the expression of   --  NINJA  --  is regulated by  --  JAZ9
42 JAZ12  --  regulates the expression of   --  NINJA  --  is regulated by  --  JAZ6
43 JAZ12  --  regulates the expression of   --  NINJA  --  is regulated by  --  JAZ4
44 JAZ12  --  regulates the expression of   --  NINJA  --  is regulated by  --  JAZ2
45 JAZ12  --  is a member of  --  JAI3 family107, transcription factor gene  --  regulates the expression of   --  ATMYB57; MYB57
46 JAZ12  --  is a member of  --  JAI3 family107, transcription factor gene  --  regulates the expression of   --  AtMYB24; MYB24
47 JAZ12  --  is a member of  --  JAI3 family107, transcription factor gene  --  regulates the expression of   --  ATMYB21; ATMYB3; MYB21
48 JAZ12  --  is a member of  --  JAI3 family107, transcription factor gene  --  regulates the expression of   --  della family, transcription factor gene
49 JAZ12  --  is a member of  --  JAI3 family107, transcription factor gene  --  is regulated by  --  COI1 complex26
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab