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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node GH3.2 ykd1/AUR3/bru6/gxh3-2
Type: Protein GRN ID: np02029 Name: GH3.2 ykd1/AUR3/bru6/gxh3-2
Annotation: YDK1, GH3.2, BRU6, GH3-2, AUR3 | Auxin-responsive GH3 family protein
Gene Locus: AT4G37390
References:
  • Takase T, Nakazawa M, Ishikawa A, Kawashima M, Ichikawa T, Takahashi N, Shimada H, Manabe K, Matsui M. ydk1-D, an auxin-responsive GH3 mutant that is involved in hypocotyl and root elongation. Plant J. 2004 Feb;37(4):471-83. PubMed PMID: 14756757.
 
Pathways: Auxins 
Gene Expression (Affy ATH1 probeset): 262099_s_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  modify  --  CENH3; HTR12
3 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77
4 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7
5 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17
6 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is a member of  --  ykd1 family22, transcription factor gene
7 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  modify  --  CENH3; HTR12  --  is modified by  --  AtAUR1; AUR1
8 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  modify  --  CENH3; HTR12  --  is modified by  --  AtAUR2; AUR2
9 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77  --  interacts with  --  AT3G48510
10 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77  --  interacts with  --  AT1G10585
11 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77  --  interacts with  --  pyl8
12 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77  --  interacts with  --  AT3G16120
13 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77  --  interacts with  --  TPR1
14 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATWRKY23; WRKY23
15 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATCKX5
16 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ARF4
17 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ARF3
18 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ARF3; ARL1; ATARL1
19 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT4G12510
20 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ZFP6
21 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  LBD18
22 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT4G17350
23 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  BRL3
24 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ASL18; LBD16
25 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT5G02760
26 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT3G50340
27 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  GATA23
28 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATZFP2; ZFP2
29 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT1G78110
30 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT1G29440
31 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATPIN1
32 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  regulates the expression of   --  ASL16; LBD29
33 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  is regulated by  --  AXR5
34 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA34
35 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA33
36 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA32; MEE10
37 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA31
38 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA30
39 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA29
40 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA28
41 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA26; PAP1
42 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA20
43 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA18
44 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA16
45 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA15
46 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA14
47 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA13
48 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA10
49 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA9
50 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA8
51 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA6; SHY1
52 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5
53 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  ATAUX2-11; IAA4
54 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  AXR3
55 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA19
56 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA27; PAP2
57 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA2
58 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA3
59 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  AXR2
60 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  IAA11
61 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  BDL
62 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  ARF5
63 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  RPL24; RPL24B; STV1
64 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  ATL5; OLI5; PGY3; RPL5A
65 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  RGA1
66 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  interacts with  --  ARF20
67 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF7  --  is a member of  --  ARF1 family35, transcription factor gene
68 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17  --  regulates the expression of   --  ath-miR160a
69 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17  --  interacts with  --  TPR4; WSIP2
70 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17  --  interacts with  --  TPR3
71 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17  --  interacts with  --  TPR2
72 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17  --  is the target gene of  --  ath-miR160c
73 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17  --  is the target gene of  --  ath-miR160b
74 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is a member of  --  ykd1 family22, transcription factor gene  --  has family member  --  GH3.9
75 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is a member of  --  ykd1 family22, transcription factor gene  --  has family member  --  PUCHI
76 GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is a member of  --  ykd1 family22, transcription factor gene  --  has family member  --  GH3.17
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