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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR5649b
Type: non-coding-miRNA GRN ID: nn06343 Name: ath-miR5649b
Annotation:
miRBase: Link
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR5649b  --  inhibit the expression of  --  AT5G36275
3 ath-miR5649b  --  inhibit the expression of  --  AT3G42860
4 ath-miR5649b  --  inhibit the expression of  --  AT1G76280
5 ath-miR5649b  --  inhibit the expression of  --  AT5G36275  --  is the target gene of  --  ath-miR5649a
6 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.814133) with  --  AT2G47790
7 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.891253) with  --  AT3G24255
8 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.891253) with  --  AT3G23910
9 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.819949) with  --  ATO
10 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.819164) with  --  ABO1; AtELP1; ELO2
11 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.854924) with  --  AT5G13560
12 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.807832) with  --  AT5G47090
13 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.86971) with  --  XRI; XRI1
14 ath-miR5649b  --  inhibit the expression of  --  AT3G42860  --  has similar expression pattern (mutual information value=0.874716) with  --  SMU2
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