Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR854a
Type: non-coding-miRNA GRN ID: nn06219 Name: ath-miR854a
Annotation: transposable element gene
Gene Locus: AT5G32228
miRBase: Link
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR854a  --  inhibit the expression of  --  HINT3
3 ath-miR854a  --  inhibit the expression of  --  AT5G19590
4 ath-miR854a  --  inhibit the expression of  --  AT5G05100
5 ath-miR854a  --  inhibit the expression of  --  ORL1; ORL1; ORTHL; VIM6
6 ath-miR854a  --  inhibit the expression of  --  AT4G01110
7 ath-miR854a  --  inhibit the expression of  --  PRA1.B1
8 ath-miR854a  --  inhibit the expression of  --  AT1G76878
9 ath-miR854a  --  inhibit the expression of  --  AGO7; ZIP
10 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2
11 ath-miR854a  --  inhibit the expression of  --  AT1G53770
12 ath-miR854a  --  inhibit the expression of  --  AT1G50732
13 ath-miR854a  --  inhibit the expression of  --  AT1G49290
14 ath-miR854a  --  inhibit the expression of  --  AT1G15530
15 ath-miR854a  --  inhibit the expression of  --  ACA5; ATACA5
16 ath-miR854a  --  inhibit the expression of  --  AT1G01453
17 ath-miR854a  --  inhibit the expression of  --  HINT3  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
18 ath-miR854a  --  inhibit the expression of  --  HINT3  --  is the target gene of  --  ath-miR854e
19 ath-miR854a  --  inhibit the expression of  --  HINT3  --  is the target gene of  --  ath-miR854d
20 ath-miR854a  --  inhibit the expression of  --  HINT3  --  is the target gene of  --  ath-miR854c
21 ath-miR854a  --  inhibit the expression of  --  HINT3  --  is the target gene of  --  ath-miR854b
22 ath-miR854a  --  inhibit the expression of  --  AT5G19590  --  interacts with  --  ATPDI2; ATPDIL1-4; PDI2; PDIL1-4
23 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.830531) with  --  AT2G46260
24 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.873971) with  --  WRKY4
25 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.804439) with  --  AT1G70590
26 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.871768) with  --  AT3G19910
27 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.818244) with  --  FYD
28 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=1.00124) with  --  AT1G29760
29 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.833499) with  --  ARI1; ATARI1
30 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.835979) with  --  BAM4; BMY6
31 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.81445) with  --  AT5G63260
32 ath-miR854a  --  inhibit the expression of  --  AT5G05100  --  has similar expression pattern (mutual information value=0.839274) with  --  SBP1
33 ath-miR854a  --  inhibit the expression of  --  PRA1.B1  --  interacts with  --  AT5G63030
34 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2  --  interacts with  --  ATMLO4; MLO4
35 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2  --  interacts with  --  ATCPK1; CPK1
36 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2  --  interacts with  --  RXW8
37 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2  --  interacts with  --  ATCNGC5; CNGC5
38 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2  --  interacts with  --  AT5G15240
39 ath-miR854a  --  inhibit the expression of  --  AtRLP10; CLV2  --  interacts with  --  CRN; SOL2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact