Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G15120
Type: non-coding-other GRN ID: nn01592 Name:
Annotation: pseudogene, disease-resistance family protein / fatty acid elongase-related, similar to fatty acid elongase 1 (FAE1) (Arabidopsis thaliana) GI:881615; similar to NtPRp27 (GI:5360263) (Nicotiana tabacum)similar to R 14 protein (GI:27764542) (Glycine max); contains Pfam profile PF04450: Plant Basic Secretory Protein; blastp match of 71% identity and 6.0e-20 P-value to GP|18674893|emb|CAD23312.1||AX358183 unnamed protein product {synthetic construct}
Gene Locus: AT2G15120
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7
3 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.885112) with  --  AT2G15220
4 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.991806) with  --  AT2G21045
5 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.912992) with  --  AT1G12080
6 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.935153) with  --  BGLU35; TGG5
7 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.935153) with  --  BGLU34; TGG4
8 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=1.01777) with  --  AT1G06090
9 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=1.01777) with  --  AT1G06120
10 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.878251) with  --  UPB1
11 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=1.07575) with  --  AT1G02360
12 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=1.00392) with  --  ATMLP-300B; MEE36; MLP-300B
13 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.934211) with  --  ATHB20; HB20
14 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.87279) with  --  AT3G16650
15 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.965917) with  --  TET6
16 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.803447) with  --  AT3G12210
17 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.817737) with  --  NSH4
18 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.817737) with  --  NSH3
19 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.958265) with  --  ATMYB68; MYB68
20 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.988837) with  --  AT5G19340
21 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  has similar expression pattern (mutual information value=0.858489) with  --  AT4G15400
22 AT2G15120  --  has similar expression pattern (mutual information value=0.885112) with  --  AtLOG7  --  is a member of  --  AtLOG1 family57, coding gene
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact