Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR413
Type: non-coding-miRNA GRN ID: nn01194 Name: ath-miR413
Annotation: MIR413 | MIR413; miRNA
Gene Locus: AT1G62355
miRBase: Link
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR413  --  inhibit the expression of  --  AT5G44780
3 ath-miR413  --  inhibit the expression of  --  AT4G35130
4 ath-miR413  --  inhibit the expression of  --  AT4G20450
5 ath-miR413  --  inhibit the expression of  --  AT4G16970
6 ath-miR413  --  inhibit the expression of  --  AT4G03823
7 ath-miR413  --  inhibit the expression of  --  AT4G00440
8 ath-miR413  --  inhibit the expression of  --  AT3G42721
9 ath-miR413  --  inhibit the expression of  --  PPR40
10 ath-miR413  --  inhibit the expression of  --  AT3G02290
11 ath-miR413  --  inhibit the expression of  --  ATMBD9; MBD9
12 ath-miR413  --  inhibit the expression of  --  AT1G39190
13 ath-miR413  --  inhibit the expression of  --  AT5G44780  --  interacts with  --  AT3G15000
14 ath-miR413  --  inhibit the expression of  --  AT5G44780  --  interacts with  --  AT1G32580
15 ath-miR413  --  inhibit the expression of  --  AT5G44780  --  interacts with  --  AT3G06790
16 ath-miR413  --  inhibit the expression of  --  AT5G44780  --  interacts with  --  DAL; DAL1
17 ath-miR413  --  inhibit the expression of  --  AT5G44780  --  interacts with  --  AT4G20020
18 ath-miR413  --  inhibit the expression of  --  AT5G44780  --  interacts with  --  AT1G11430
19 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  AT5G47180
20 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  ATSERK2; SERK2
21 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  AT3G56370
22 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  AT2G26730
23 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  CLI1; RPK2; TOAD2
24 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  AT5G63930
25 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  AT2G37050
26 ath-miR413  --  inhibit the expression of  --  AT4G20450  --  interacts with  --  ARAC6; ATRAC6; ATROP5; RAC2; RAC6; ROP5
27 ath-miR413  --  inhibit the expression of  --  AT4G00440  --  is the target gene of  --  ath-miR5021
28 ath-miR413  --  inhibit the expression of  --  AT3G02290  --  interacts with  --  ADS2; DS2
29 ath-miR413  --  inhibit the expression of  --  AT3G02290  --  interacts with  --  ATCHX27; CHX27
30 ath-miR413  --  inhibit the expression of  --  ATMBD9; MBD9  --  interacts with  --  HIS4
31 ath-miR413  --  inhibit the expression of  --  ATMBD9; MBD9  --  interacts with  --  AT5G65360
32 ath-miR413  --  inhibit the expression of  --  ATMBD9; MBD9  --  is the target gene of  --  ath-miR3440b-5p
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact