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Location:  Home > Details for node Geranylgeranyl diphosphate
Type: Compound GRN ID: nc06001 Name: Geranylgeranyl diphosphate
Annotation: Geranylgeranyl diphosphate
KEGG Acc.: C00353
CHEBI ID:
Formula: C20H36O7P2
M.W.: 450.4432
Pathways: Gibberellins 
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate
3 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate
4 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  DMAPD
5 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  15-cis-Phytoene
6 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGR
7 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGPS1
8 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G32040
9 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G29430
10 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G20160
11 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGPS3
12 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G14530
13 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G14510
14 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGPS2; GGPS5
15 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGPS4
16 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT2G18620
17 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGPS6
18 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470
19 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  Phytyl diphosphate
20 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate  --  has product (in catalytic reaction)  --  ent-Kaurene
21 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate  --  is product (in catalytic reaction) of  --  AtCPS/GA1
22 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate  --  is product (in catalytic reaction) of  --  GGPP
23 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate  --  is product (in catalytic reaction) of  --  SPS1
24 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate  --  is product (in catalytic reaction) of  --  SPS2
25 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate  --  is product (in catalytic reaction) of  --  Geranyl diphosphate
26 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  DMAPD  --  has product (in catalytic reaction)  --  phytoene
27 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  DMAPD  --  is product (in catalytic reaction) of  --  psy
28 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  15-cis-Phytoene  --  has product (in catalytic reaction)  --  15,9'-dicis-Phytofluene
29 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  15-cis-Phytoene  --  has product (in catalytic reaction)  --  Plastoquinol
30 Geranylgeranyl diphosphate  --  has product (in catalytic reaction)  --  15-cis-Phytoene  --  has product (in catalytic reaction)  --  9,15,9'-tricis-zeta-Carotene
31 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGR  --  is modified by  --  AT4G38470
32 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGR  --  is modified by  --  AT4G35780
33 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGR  --  is modified by  --  AT2G17700
34 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.830249) with  --  AT2G16830
35 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.951479) with  --  AT2G10780
36 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.951) with  --  AT1G11690
37 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.817126) with  --  AT4G33610
38 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  GGPS2; GGPS5  --  is the target gene of  --  ath-miR2937
39 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.99654) with  --  AT2G42220
40 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.17223) with  --  RPOD1; SIG1; SIG2; SIGA; SIGB
41 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.97749) with  --  EMB2784; RPL4
42 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.09486) with  --  ATFD2; FED A
43 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.03743) with  --  CP24; LHCB6
44 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.04242) with  --  LHCB4.2
45 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.960789) with  --  AT3G14420
46 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.960789) with  --  AT3G14415
47 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.037) with  --  PRK
48 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.06171) with  --  PSAD-1
49 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.03635) with  --  ATPD; PDE332
50 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00251) with  --  PSBQ; PSBQ-1; PSBQA
51 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.02403) with  --  CHLM
52 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.950793) with  --  PORB
53 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.11356) with  --  AT4G28080
54 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.903995) with  --  AT4G38840
55 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.10503) with  --  PTAC16
56 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00485) with  --  ACA1; ATACA1; CAH1
57 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.02998) with  --  SBPASE
58 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.05912) with  --  ACSF; CHL27; CRD1
59 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.09069) with  --  GUN4
60 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00736) with  --  CCH/CHLH/GUN5
61 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00061) with  --  CaS
62 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.802194) with  --  BETA CA2; CA18; CA2
63 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.994972) with  --  AT5G19940
64 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.96536) with  --  CLA; CLA1; DEF; DXPS2; DXS
65 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.0133) with  --  ATCAO; CAO; CH1
66 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.01126) with  --  CAO; CPSRP43
67 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  AT1G74470  --  interacts with  --  ATCDPK2/CPK11
68 Geranylgeranyl diphosphate  --  is product (in catalytic reaction) of  --  Phytyl diphosphate  --  has product (in catalytic reaction)  --  Chlorophyll a
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