Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node GGPP
Type: Compound GRN ID: nc03013 Name: GGPP
Annotation: all-trans-Geranylgeranyl pyrophosphate
KEGG Acc.: C00353
CHEBI ID:
Formula: C20H36O7P2
M.W.: 450.4432
Pathways: Abscisic acid 
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 GGPP  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate
3 GGPP  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate
4 GGPP  --  has product (in catalytic reaction)  --  DMAPD
5 GGPP  --  has product (in catalytic reaction)  --  15-cis-Phytoene
6 GGPP  --  is product (in catalytic reaction) of  --  GGR
7 GGPP  --  is product (in catalytic reaction) of  --  GGPS1
8 GGPP  --  is product (in catalytic reaction) of  --  AT3G32040
9 GGPP  --  is product (in catalytic reaction) of  --  AT3G29430
10 GGPP  --  is product (in catalytic reaction) of  --  AT3G20160
11 GGPP  --  is product (in catalytic reaction) of  --  GGPS3
12 GGPP  --  is product (in catalytic reaction) of  --  AT3G14530
13 GGPP  --  is product (in catalytic reaction) of  --  AT3G14510
14 GGPP  --  is product (in catalytic reaction) of  --  GGPS2; GGPS5
15 GGPP  --  is product (in catalytic reaction) of  --  GGPS4
16 GGPP  --  is product (in catalytic reaction) of  --  AT2G18620
17 GGPP  --  is product (in catalytic reaction) of  --  GGPS6
18 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470
19 GGPP  --  is product (in catalytic reaction) of  --  Phytyl diphosphate
20 GGPP  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate  --  has product (in catalytic reaction)  --  ent-Kaurene
21 GGPP  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate  --  is product (in catalytic reaction) of  --  AtCPS/GA1
22 GGPP  --  has product (in catalytic reaction)  --  ent-Copalyl diphosphate  --  is product (in catalytic reaction) of  --  Geranylgeranyl diphosphate
23 GGPP  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate  --  is product (in catalytic reaction) of  --  SPS1
24 GGPP  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate  --  is product (in catalytic reaction) of  --  SPS2
25 GGPP  --  has product (in catalytic reaction)  --  all-trans-Nonaprenyl diphosphate  --  is product (in catalytic reaction) of  --  Geranyl diphosphate
26 GGPP  --  has product (in catalytic reaction)  --  DMAPD  --  has product (in catalytic reaction)  --  phytoene
27 GGPP  --  has product (in catalytic reaction)  --  DMAPD  --  is product (in catalytic reaction) of  --  psy
28 GGPP  --  has product (in catalytic reaction)  --  15-cis-Phytoene  --  has product (in catalytic reaction)  --  15,9'-dicis-Phytofluene
29 GGPP  --  has product (in catalytic reaction)  --  15-cis-Phytoene  --  has product (in catalytic reaction)  --  Plastoquinol
30 GGPP  --  has product (in catalytic reaction)  --  15-cis-Phytoene  --  has product (in catalytic reaction)  --  9,15,9'-tricis-zeta-Carotene
31 GGPP  --  is product (in catalytic reaction) of  --  GGR  --  is modified by  --  AT4G38470
32 GGPP  --  is product (in catalytic reaction) of  --  GGR  --  is modified by  --  AT4G35780
33 GGPP  --  is product (in catalytic reaction) of  --  GGR  --  is modified by  --  AT2G17700
34 GGPP  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.830249) with  --  AT2G16830
35 GGPP  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.951479) with  --  AT2G10780
36 GGPP  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.951) with  --  AT1G11690
37 GGPP  --  is product (in catalytic reaction) of  --  AT3G14510  --  has similar expression pattern (mutual information value=0.817126) with  --  AT4G33610
38 GGPP  --  is product (in catalytic reaction) of  --  GGPS2; GGPS5  --  is the target gene of  --  ath-miR2937
39 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.99654) with  --  AT2G42220
40 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.17223) with  --  RPOD1; SIG1; SIG2; SIGA; SIGB
41 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.97749) with  --  EMB2784; RPL4
42 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.09486) with  --  ATFD2; FED A
43 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.03743) with  --  CP24; LHCB6
44 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.04242) with  --  LHCB4.2
45 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.960789) with  --  AT3G14420
46 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.960789) with  --  AT3G14415
47 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.037) with  --  PRK
48 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.06171) with  --  PSAD-1
49 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.03635) with  --  ATPD; PDE332
50 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00251) with  --  PSBQ; PSBQ-1; PSBQA
51 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.02403) with  --  CHLM
52 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.950793) with  --  PORB
53 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.11356) with  --  AT4G28080
54 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.903995) with  --  AT4G38840
55 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.10503) with  --  PTAC16
56 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00485) with  --  ACA1; ATACA1; CAH1
57 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.02998) with  --  SBPASE
58 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.05912) with  --  ACSF; CHL27; CRD1
59 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.09069) with  --  GUN4
60 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00736) with  --  CCH/CHLH/GUN5
61 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.00061) with  --  CaS
62 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.802194) with  --  BETA CA2; CA18; CA2
63 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.994972) with  --  AT5G19940
64 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=0.96536) with  --  CLA; CLA1; DEF; DXPS2; DXS
65 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.0133) with  --  ATCAO; CAO; CH1
66 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  has similar expression pattern (mutual information value=1.01126) with  --  CAO; CPSRP43
67 GGPP  --  is product (in catalytic reaction) of  --  AT1G74470  --  interacts with  --  ATCDPK2/CPK11
68 GGPP  --  is product (in catalytic reaction) of  --  Phytyl diphosphate  --  has product (in catalytic reaction)  --  Chlorophyll a
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact