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Location:  Home > Details for node FPA family, transcription factor gene
Type: Family GRN ID: gf06013 Name: FPA family, transcription factor gene
Annotation: transcription factor gene family, members include FPA, GI, FVE
References:
  • Hornyik C, Terzi LC, Simpson GG. The spen family protein FPA controls alternative cleavage and polyadenylation of RNA. Dev Cell. 2010 Feb 16;18(2):203-13. doi: 10.1016/j.devcel.2009.12.009. Epub 2010 Jan 14. PubMed PMID: 20079695.
 
Pathways: Gibberellins 
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS
3 FPA family, transcription factor gene  --  has family member  --  FVE
4 FPA family, transcription factor gene  --  has family member  --  GI
5 FPA family, transcription factor gene  --  has family member  --  FPA
6 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  regulates the expression of   --  FLC
7 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  regulates the expression of   --  COR15A
8 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  is regulated by  --  SOC1
9 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  interacts with  --  ATHDA5; HDA05; HDA5
10 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  interacts with  --  HDA09; HDA9
11 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  interacts with  --  ATHDA15; HDA15
12 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  interacts with  --  CO; FG
13 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  interacts with  --  ATICE1; ICE1; SCRM
14 FPA family, transcription factor gene  --  regulates the expression of   --  CBFS  --  interacts with  --  FLK
15 FPA family, transcription factor gene  --  has family member  --  FVE  --  interacts with  --  MSI5; NFC5
16 FPA family, transcription factor gene  --  has family member  --  FVE  --  interacts with  --  AT2G42940
17 FPA family, transcription factor gene  --  has family member  --  FVE  --  interacts with  --  DDB1B
18 FPA family, transcription factor gene  --  has family member  --  FVE  --  interacts with  --  DDB1A
19 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  ATSOS3; CBL4; SOS3
20 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
21 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  SPY
22 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  ADO3; FKF1
23 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  ADO1; FKL2; LKP1; ZTL
24 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  COP1
25 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  ELF3; PYK20
26 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  ADO2; LKP2
27 FPA family, transcription factor gene  --  has family member  --  GI  --  interacts with  --  SPL11
28 FPA family, transcription factor gene  --  has family member  --  FPA  --  interacts with  --  AT2G25280
29 FPA family, transcription factor gene  --  has family member  --  FPA  --  interacts with  --  ATMEK4; ATMKK4; MKK4
30 FPA family, transcription factor gene  --  has family member  --  FPA  --  interacts with  --  AT1G77400
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