Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node acs2 bype 2 family, coding gene
Type: Family GRN ID: gf05020 Name: acs2 bype 2 family, coding gene
Annotation: coding gene family, members include ACS9, ACS5, ACs4
References:
  • Christians MJ, Gingerich DJ, Hansen M, Binder BM, Kieber JJ, Vierstra RD. The BTB ubiquitin ligases ETO1, EOL1 and EOL2 act collectively to regulate ethylene biosynthesis in Arabidopsis by controlling type-2 ACC synthase levels. Plant J. 2009 Jan;57(2):332-45. doi: 10.1111/j.1365-313X.2008.03693.x. Epub 2008 Oct 30. PubMed PMID: 18808454; PubMed Central PMCID: PMC2807402.
 
Pathways: Ethylene 
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 acs2 bype 2 family, coding gene  --  has family member  --  ACs4
3 acs2 bype 2 family, coding gene  --  has family member  --  ACS5
4 acs2 bype 2 family, coding gene  --  has family member  --  ACS9
5 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  interacts with  --  AT5G10210
6 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  interacts with  --  XBAT32
7 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  has product (in catalytic reaction)  --  MTA
8 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  has product (in catalytic reaction)  --  MTA
9 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  has product (in catalytic reaction)  --  ACC
10 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  is a member of  --  phosphorylated acs2 bype 2 family, coding gene
11 acs2 bype 2 family, coding gene  --  has family member  --  ACs4  --  is a member of  --  Family76, coding gene
12 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  is regulated by  --  ETO family, chromatin remodeling & transcription regulator gene
13 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  is regulated by  --  ATERF11
14 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  interacts with  --  GRF3; RCI1
15 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  interacts with  --  CK1; CKL1
16 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  interacts with  --  14-3-3OMEGA
17 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  interacts with  --  ATEOL1; ETO1
18 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  interacts with  --  EOL2
19 acs2 bype 2 family, coding gene  --  has family member  --  ACS5  --  interacts with  --  EOL1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact