Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node Family78, coding gene

Type: Family	GRN ID: gf05004	Name: Family78, coding gene
Annotation:	coding gene family, members include ACS2, ACS6
Pathways:	Ethylene

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Display edge: validated and predicted
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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	Family78, coding gene -- has family member -- ACS6
3	Family78, coding gene -- has family member -- ACS2
4	Family78, coding gene -- has family member -- ACS6 -- interacts with -- ABI1
5	Family78, coding gene -- has family member -- ACS6 -- interacts with -- GRF3; RCI1
6	Family78, coding gene -- has family member -- ACS6 -- interacts with -- 14-3-3OMEGA
7	Family78, coding gene -- has family member -- ACS6 -- has product (in catalytic reaction) -- MTA
8	Family78, coding gene -- has family member -- ACS6 -- has product (in catalytic reaction) -- MTA
9	Family78, coding gene -- has family member -- ACS6 -- has product (in catalytic reaction) -- ACC
10	Family78, coding gene -- has family member -- ACS6 -- is a member of -- Family76, coding gene
11	Family78, coding gene -- has family member -- ACS6 -- has similar expression pattern (mutual information value=0.986169) with -- AT5G59550
12	Family78, coding gene -- has family member -- ACS2 -- is regulated by -- ATERF11

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

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