Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AtLOG1 family57, coding gene
Type: Family GRN ID: gf04004 Name: AtLOG1 family57, coding gene
Annotation: coding gene family, members include AtLOG1, AtLOG2, AtLOG3, AtLOG4, AtLOG5, AtLOG6, AtLOG7, AtLOG8, AtLOG9
Pathways: Cytokinins 
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  cZ
3 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  DZ
4 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  tZ
5 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  iP
6 AtLOG1 family57, coding gene  --  has family member  --  AtLOG9
7 AtLOG1 family57, coding gene  --  has family member  --  AtLOG8
8 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7
9 AtLOG1 family57, coding gene  --  has family member  --  AtLOG6
10 AtLOG1 family57, coding gene  --  has family member  --  AtLOG5
11 AtLOG1 family57, coding gene  --  has family member  --  AtLOG4
12 AtLOG1 family57, coding gene  --  has family member  --  AtLOG3
13 AtLOG1 family57, coding gene  --  has family member  --  AtLOG2
14 AtLOG1 family57, coding gene  --  has family member  --  AtLOG1
15 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  cZ  --  has product (in catalytic reaction)  --  cZR
16 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  cZ  --  has product (in catalytic reaction)  --  Adenine
17 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  cZ  --  has product (in catalytic reaction)  --  Czrmp
18 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  DZ  --  has product (in catalytic reaction)  --  DZMP
19 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  DZ  --  has product (in catalytic reaction)  --  DZR
20 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  DZ  --  is a member of  --  nc4012 family63, coding gene
21 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  tZ  --  has product (in catalytic reaction)  --  tZR
22 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  tZ  --  is product (in catalytic reaction) of  --  tZRMP
23 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  iP  --  has product (in catalytic reaction)  --  iPRMP
24 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  iP  --  has product (in catalytic reaction)  --  iPR
25 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  iP  --  has product (in catalytic reaction)  --  Reduced acceptor
26 AtLOG1 family57, coding gene  --  has product (in catalytic reaction)  --  iP  --  has product (in catalytic reaction)  --  Prenal
27 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.885112) with  --  AT2G15220
28 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.885112) with  --  AT2G15120
29 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.991806) with  --  AT2G21045
30 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.912992) with  --  AT1G12080
31 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.935153) with  --  BGLU35; TGG5
32 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.935153) with  --  BGLU34; TGG4
33 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=1.01777) with  --  AT1G06090
34 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=1.01777) with  --  AT1G06120
35 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.878251) with  --  UPB1
36 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=1.07575) with  --  AT1G02360
37 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=1.00392) with  --  ATMLP-300B; MEE36; MLP-300B
38 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.934211) with  --  ATHB20; HB20
39 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.87279) with  --  AT3G16650
40 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.965917) with  --  TET6
41 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.803447) with  --  AT3G12210
42 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.817737) with  --  NSH4
43 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.817737) with  --  NSH3
44 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.958265) with  --  ATMYB68; MYB68
45 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.988837) with  --  AT5G19340
46 AtLOG1 family57, coding gene  --  has family member  --  AtLOG7  --  has similar expression pattern (mutual information value=0.858489) with  --  AT4G15400
47 AtLOG1 family57, coding gene  --  has family member  --  AtLOG3  --  interacts with  --  ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2
48 AtLOG1 family57, coding gene  --  has family member  --  AtLOG3  --  interacts with  --  B73; CHL6; CNX; CNX1; SIR4
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact