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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATNCED3 family40, coding gene
Type: Family GRN ID: gf03002 Name: ATNCED3 family40, coding gene
Annotation: coding gene family, members include ATNCED3, ATNCED5, ATNCED6, ATNCED9, ATNCED2, NCED4
Pathways: Abscisic acid;  Gibberellins 
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATNCED3 family40, coding gene  --  interacts with  --  DOR
3 ATNCED3 family40, coding gene  --  is regulated by  --  XERICO
4 ATNCED3 family40, coding gene  --  has family member  --  NCED4
5 ATNCED3 family40, coding gene  --  has family member  --  ATNCED2
6 ATNCED3 family40, coding gene  --  has family member  --  ATNCED9
7 ATNCED3 family40, coding gene  --  has family member  --  ATNCED6
8 ATNCED3 family40, coding gene  --  has family member  --  ATNCED5
9 ATNCED3 family40, coding gene  --  has family member  --  ATNCED3
10 ATNCED3 family40, coding gene  --  interacts with  --  DOR  --  interacts with  --  ABI1 family46, coding gene
11 ATNCED3 family40, coding gene  --  interacts with  --  DOR  --  interacts with  --  AAO3
12 ATNCED3 family40, coding gene  --  interacts with  --  DOR  --  interacts with  --  ASK14; SK14
13 ATNCED3 family40, coding gene  --  is regulated by  --  XERICO  --  is regulated by  --  della family, transcription factor gene
14 ATNCED3 family40, coding gene  --  is regulated by  --  XERICO  --  is regulated by  --  RGA1 family99, transcription factor gene
15 ATNCED3 family40, coding gene  --  is regulated by  --  XERICO  --  interacts with  --  AtTLP9
16 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  interacts with  --  ATSERAT1;1; SAT-52; SAT5; SERAT1;1
17 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  interacts with  --  VAR3
18 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.934672) with  --  PIFI
19 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.854796) with  --  PGR5-LIKE A
20 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.868264) with  --  ACD1-LIKE; PTC52; TIC55-IV
21 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.846391) with  --  LHCA1
22 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.889075) with  --  AT3G62550
23 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.851474) with  --  ATFRO6; FRO6; FRO6
24 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.851474) with  --  ATFRO7; FRO7
25 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has similar expression pattern (mutual information value=0.853957) with  --  AT5G35170
26 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has product (in catalytic reaction)  --  C25-Epoxy-apo-aldehyde
27 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has product (in catalytic reaction)  --  12'-apo-Carotenal
28 ATNCED3 family40, coding gene  --  has family member  --  NCED4  --  has product (in catalytic reaction)  --  xanthoxin
29 ATNCED3 family40, coding gene  --  has family member  --  ATNCED9  --  is regulated by  --  som
30 ATNCED3 family40, coding gene  --  has family member  --  ATNCED3  --  interacts with  --  AO
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