PvGEA: Common Beam Gene Expression Atlas and Network Analysis
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BLAST
Gene Expression and Network
Instruction
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The RNA-seq data was mapped to the following genome:
Species
Phaseolus Vulgaris
Genotype
Genome annotation
JGI
Description
Phaseolus Vulgaris, JGI phytozome12 442
# of experiments / conditions / samples
1 / 24 / 24
Choose sequence type for analysis
27,433 genes
or
36,995 transcripts
Expression Profile
Normalize and compare gene expression level; Visualize gene expression level; Search genes by specified keywords, Coordinates and expression pattern
Start from choosing samples
Co-expression
Search co-expressed genes; Build co-expressed gene modules
Start from choosing samples
Gene Enrichment / Pathway Analysis
Identify possible function of gene group from your input or DE analysis
Gene Ontology analysis
KEGG pathway analysis