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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
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Relationship Details
Type: protein-protein interaction GRN ID: re144843 Name: Validated: Y
Direction: Unknown or N/A
Steps: Direct effect
Upstream node(s):
Downstream node(s):
References:
  • Zhu Y, Tepperman JM, Fairchild CD, Quail PH. Phytochrome B binds with greater apparent affinity than phytochrome A to the basic helix-loop-helix factor PIF3 in a reaction requiring the PAS domain of PIF3. Proc Natl Acad Sci U S A. 2000 Nov 21;97(24):13419-24. PubMed PMID: 11069292; PubMed Central PMCID: PMC27239.
  • Fairchild CD, Schumaker MA, Quail PH. HFR1 encodes an atypical bHLH protein that acts in phytochrome A signal transduction. Genes Dev. 2000 Sep 15;14(18):2377-91. PubMed PMID: 10995393; PubMed Central PMCID: PMC316929.
  • Ni M, Tepperman JM, Quail PH. PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein. Cell. 1998 Nov 25;95(5):657-67. PubMed PMID: 9845368.
  • Oh E, Kim J, Park E, Kim JI, Kang C, Choi G. PIL5, a phytochrome-interacting basic helix-loop-helix protein, is a key negative regulator of seed germination in Arabidopsis thaliana. Plant Cell. 2004 Nov;16(11):3045-58. Epub 2004 Oct 14. PubMed PMID: 15486102; PubMed Central PMCID: PMC527197.
  • Huq E, Quail PH. PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis. EMBO J. 2002 May 15;21(10):2441-50. PubMed PMID: 12006496; PubMed Central PMCID: PMC126004.
 
Cross Reference: biogrid:268305  biogrid:268309  biogrid:268473  biogrid:268488  biogrid:268630  
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