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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node pal4
Type: Protein GRN ID: np08006 Name: pal4
Annotation: PAL4 | phenylalanine ammonia-lyase 4 [EC:4.3.1.24]
Gene Locus: AT3G10340
Pathways: Salicylic acid 
Gene Expression (Affy ATH1 probeset): 259149_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid
3 pal4  --  interacts with  --  SP1L4
4 pal4  --  interacts with  --  pal2
5 pal4  --  interacts with  --  AT2G44130
6 pal4  --  interacts with  --  AT1G15670
7 pal4  --  interacts with  --  pal1
8 pal4  --  is a member of  --  pal2 family111, coding gene
9 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  Cinnamoyl-CoA
10 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  nitric oxide
11 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  Benzaldehyde
12 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  O-coumarate
13 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  para-Coumaric acid
14 pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  is product (in catalytic reaction) of  --  Phenylalanine
15 pal4  --  interacts with  --  pal2  --  interacts with  --  AT3G59940
16 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  ATFLS1; FLS; FLS1
17 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  DFR; M318; TT3
18 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  ANS; LDOX; TDS4; TT18
19 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  ATCHS; CHS; TT4
20 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  ASK13; SK13
21 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  ARR12
22 pal4  --  interacts with  --  AT2G44130  --  interacts with  --  ARR1
23 pal4  --  interacts with  --  AT2G44130  --  is the target gene of  --  ath-miR414
24 pal4  --  interacts with  --  AT1G15670  --  interacts with  --  PSAD-1
25 pal4  --  interacts with  --  AT1G15670  --  interacts with  --  ATSYP23; SYP23
26 pal4  --  interacts with  --  pal1  --  interacts with  --  AT3G15180
27 pal4  --  interacts with  --  pal1  --  interacts with  --  AT1G80440
28 pal4  --  interacts with  --  pal1  --  is regulated by  --  PRHA
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