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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node pal2
Type: Protein GRN ID: np08004 Name: pal2
Annotation: PAL2, ATPAL2 | phenylalanine ammonia-lyase 2 [EC:4.3.1.24]
Gene Locus: AT3G53260
Pathways: Salicylic acid 
Gene Expression (Affy ATH1 probeset): 251984_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid
3 pal2  --  interacts with  --  AT3G59940
4 pal2  --  interacts with  --  SP1L4
5 pal2  --  interacts with  --  AT2G44130
6 pal2  --  interacts with  --  AT1G15670
7 pal2  --  interacts with  --  pal4
8 pal2  --  has similar expression pattern (mutual information value=0.815304) with  --  pal1
9 pal2  --  is a member of  --  pal2 family111, coding gene
10 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  Cinnamoyl-CoA
11 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  nitric oxide
12 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  Benzaldehyde
13 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  O-coumarate
14 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  para-Coumaric acid
15 pal2  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  is product (in catalytic reaction) of  --  Phenylalanine
16 pal2  --  interacts with  --  AT3G59940  --  interacts with  --  ARR12
17 pal2  --  interacts with  --  AT3G59940  --  interacts with  --  ARR1
18 pal2  --  interacts with  --  AT2G44130  --  interacts with  --  ATFLS1; FLS; FLS1
19 pal2  --  interacts with  --  AT2G44130  --  interacts with  --  DFR; M318; TT3
20 pal2  --  interacts with  --  AT2G44130  --  interacts with  --  ANS; LDOX; TDS4; TT18
21 pal2  --  interacts with  --  AT2G44130  --  interacts with  --  ATCHS; CHS; TT4
22 pal2  --  interacts with  --  AT2G44130  --  interacts with  --  ASK13; SK13
23 pal2  --  interacts with  --  AT2G44130  --  is the target gene of  --  ath-miR414
24 pal2  --  interacts with  --  AT1G15670  --  interacts with  --  PSAD-1
25 pal2  --  interacts with  --  AT1G15670  --  interacts with  --  ATSYP23; SYP23
26 pal2  --  has similar expression pattern (mutual information value=0.815304) with  --  pal1  --  interacts with  --  AT3G15180
27 pal2  --  has similar expression pattern (mutual information value=0.815304) with  --  pal1  --  interacts with  --  AT1G80440
28 pal2  --  has similar expression pattern (mutual information value=0.815304) with  --  pal1  --  is regulated by  --  PRHA
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